Table 1 Pairwise nucleotide and amino acid sequence identities of the open reading frames (ORFs) in the bitter gourd yellowing crumple virus (BYCV) genome were calculated using the software Sequence Demarcation Tool v1.2
Genus | Virus abbreviation-GenBank number | Nucleotide identity (%) of complete genome | Nucleotide and amino acid identity (%, nt/aa) | ||||||
|---|---|---|---|---|---|---|---|---|---|
ORF0/P0 | ORF1/P1 | ORF1-ORF2/P1-P2 | ORF3/P3 | ORF3a/P3a | ORF4/P4 | ORF3-ORF5/P3-P5 | |||
Polerovirus | CABYV-NC_003688.1 | 79.80 | 82.10/74.80 | 72.00/64.30 | 75.60/71.00 | 95.70/95.00 | 94.90/97.80 | 95.66/91.60 | 85.70/88.30 |
Polerovirus | PLRV-NC_001747.1 | 56.50 | 48.20/12.90 | 51.60/26.80 | 57.40/43.80 | 66.40/59.30 | 73.20/80.00 | 67.50/45.60 | 54.10/29.10 |
Polerovirus | BChV-NC_002766.1 | 58.00 | 45.30/10.70 | 51.30/26.10 | 56.70/44.40 | 69.30/64.80 | 82.50/64.40 | 68.40/46.20 | 59.20/43.20 |
Polerovirus | BMYV-NC_003491.1 | 63.50 | 55.00/37.60 | 61.20/45.30 | 65.50/56.40 | 68.60/63.80 | 83.90/62.20 | 69.60/46.80 | 59.80/40.40 |
Polerovirus | CtRLV-NC_006265.1 | 55.30 | 46.30/10.00 | 51.90/29.50 | 57.00/46.60 | 60.70/49.20 | 67.20/70.50 | 58.70/33.90 | 53.60/28.40 |
Polerovirus | TVDV-NC_010732.1 | 57.20 | 51.00/23.20 | 55.00/27.40 | 60.70/48.10 | 63.40/54.00 | 71.00/77.80 | 62.90/10.90 | 52.00/23.30 |
Polerovirus | MABYV-NC_010809.1 | 72.601 | 78.40/69.30 | 72.60/65.80 | 74.80/73.40 | 80.20/76.90 | 73.90/71.10 | 80.70/66.30 | 67.90/56.90 |
Polerovirus | CLRDV-NC_014545.1 | 60.30 | 46.30/14.80 | 51.80/30.00 | 58.10/47.60 | 69.30/64.80 | 71.70/68.90 | 69.20/48.80 | 67.00/62.50 |
Polerovirus | PepVYV-NC_015050.1 | 62.401 | 49.80/12.00 | 54.40/22.90 | 60.60/48.10 | 65.90/50.80 | 73.20/80.00 | 65.30/12.20 | 64.90/50.60 |
Polerovirus | SABYV-NC_018571.2 | 60.601 | 46.70/13.40 | 49.70/21.20 | 56.10/39.30 | 80.30/78.40 | 71.00/95.46 | 80.80/67.90 | 67.90/56.50 |
Polerovirus | MYDV-RMV-NC_021484.1 | 56.40 | 43.80/11.60 | 51.10/28.20 | 57.30 /45.70 | 67.10/57.80 | 51.40/42.20 | 68.30/37.70 | 56.80/35.20 |
Polerovirus | PABYV-NC_030225.1 | 62.80 | 48.60/13.50 | 54.10/16.60 | 57.90/35.40 | 86.70/84.40 | 73.90/77.80 | 87.20/77.50 | 73.20/59.70 |
Polerovirus | PuPV-NC_055513.1 | 60.50 | 49.40/12.60 | 48.40/14.90 | 54.00/35.40 | 86.80/84.40 | 72.50/77.80 | 87.30/77.00 | 72.90/66.50 |
Polerovirus | ScYLV-NC_000874.1 | 53.00 | 43.90/12.20 | 49.40/21.20 | 54.80/38.40 | 53.60/36.20 | 60.00/61.40 | 55.20/8.70 | 50.80/22.40 |
Enamovirus | PEMV-NC_003629.1 | 50.00 | 45.80/9.00 | 47.80/11.00 | 49.30/25.60 | 50.50/17.60 | NA | NA | 50.20/28.20 |
Enamovirus | CVEV-NC_021564.1 | 50.10 | 50.20/10.10 | 47.60/10.50 | 48.60/23.90 | 53.00/31.70 | NA | NA | 53.50/38.80 |
Enamovirus | GVEV1-NC_034836.1 | 48.10 | 48.70/10.10 | 44.20/9.10 | 48.30/23.30 | 46.20/28.00 | NA | NA | 45.60/24.80 |
Polemovirus | PnLV-NC_011543.1 | 50.70 | 42.50/8.40 | 49.10/18.10 | NA | 44.50/8.60 | NA | NA | NA |