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Table 1 Variation of clones with nucleotide deletion/mutation in sequence of the short non-coding sequence, UPD and TLS in TMV(24A+UPD) during serial passaging

From: Poly(A) introduced upstream of the upstream pseudoknot domain of Tobacco mosaic virus led to sequence deletion after serial passaging in host plants

Serial passaging

Number of clones with nucleotide deletion/mutation

1st

5 (1 nt: 4; 2 nt: 1)

2nd

7 (1 nt: 6; 2 nt: 1)

3rd

8 (1 nt: 7; 2 nt: 1)

4th

13 (1 nt: 8; 2 nt: 5)

5th

28 (1 nt: 12; 2 nt: 13; 3 nt: 2; 4 nt: 1)

6th

32 (2 nt: 28; 3 nt: 2; 4 nt: 1; 10 nt: 1)

7th

32 (1 nt: 2; 2 nt: 20; 3 nt: 8; 4 nt: 2)

8th

32 (2 nt: 20; 3 nt: 5; 22 nt: 2; 25 nt: 3; 42 nt: 2)

9th

32 (2 nt: 32)

10th

32 (23 nt: 32)