Table 1 Summary of mapping reads of the RNA-seq
Statistics term | Result (CK-1) | Result (CK-2) | Result (CK-3) | Result (W20–1) | Result (W20–2) | Result (W20–3) |
|---|---|---|---|---|---|---|
Raw reads | 54,167,714 | 54,622,072 | 60,571,914 | 46,590,920 | 51,401,188 | 53,178,180 |
Clean reads | 51,188,492 | 52,132,534 | 56,991,586 | 43,435,900 | 50,251,022 | 50,447,680 |
UnMapped | 2,415,949 | 2,557,145 | 2,866,389 | 3,073,804 | 2,800,927 | 2,719,917 |
Mapped reads | 48,772,543 | 49,575,389 | 54,125,197 | 40,362,096 | 47,450,095 | 47,727,773 |
Mapping rate | 95.28% | 95.09% | 94.97% | 92.92% | 94.43% | 94.61% |
Unique mapping | 45,208,303 | 45,963,332 | 50,177,503 | 37,278,094 | 44,907,881 | 44,312,628 |
Unique mapping rate | 88.32% | 88.17% | 88.04% | 85.82% | 89.37% | 87.84% |