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Table 1 Summary of mapping reads of the RNA-seq

From: Comparative transcriptome analysis in Triticum aestivum infecting wheat dwarf virus reveals the effects of viral infection on phytohormone and photosynthesis metabolism pathways

Statistics term Result (CK-1) Result (CK-2) Result (CK-3) Result (W20–1) Result (W20–2) Result (W20–3)
Raw reads 54,167,714 54,622,072 60,571,914 46,590,920 51,401,188 53,178,180
Clean reads 51,188,492 52,132,534 56,991,586 43,435,900 50,251,022 50,447,680
UnMapped 2,415,949 2,557,145 2,866,389 3,073,804 2,800,927 2,719,917
Mapped reads 48,772,543 49,575,389 54,125,197 40,362,096 47,450,095 47,727,773
Mapping rate 95.28% 95.09% 94.97% 92.92% 94.43% 94.61%
Unique mapping 45,208,303 45,963,332 50,177,503 37,278,094 44,907,881 44,312,628
Unique mapping rate 88.32% 88.17% 88.04% 85.82% 89.37% 87.84%