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Table 1 Sources of YMMV isolates

From: Genetic diversity and genome recombination in Yam mild mosaic virus isolates

Isolate

Year of collection

Geographic location

Host

GenBank accession no.

Reference

FX1

2012

Fengxian, Jiangsu

D. opposita

KJ125474

This work

FX2

2012

Fengxian, Jiangsu

D. opposita

KJ789113

This work

Luzhai

2010

Luzhai, Guangxi

D. opposita

JF357963

This work

LZ1

2010

Luzhai, Guangxi

D. alata

KJ789114

This work

Nanning

2010

Nanning, Guangxi

D. opposita

JF357962

This work

NC1

2011

Nanchang, Jiangxi

D. alata

KJ125476

This work

NC2

2011

Nanchang, Jiangxi

D. alata

KJ125477

This work

NC3

2011

Nanchang, Jiangxi

D. alata

KJ125473

This work

NN1

2011

Nanning, Guangxi

D. alata

KJ125472

This work

NN2

2010

Nanning, Guangxi

D. japonica

KJ789115

This work

NN3

2011

Nanning, Guangxi

D. alata

KJ789116

This work

NN4

2011

Nanning, Guangxi

D. alata

KJ789117

This work

NN5

2011

Nanning, Guangxi

D. alata

KJ789118

This work

SG1

2011

Shouguang, Shandong

D. opposita

KJ789119

This work

SG2

2011

Shouguang, Shandong

D. opposita

KJ789120

This work

WM1

2010

Wuming, Guangxi

D. japonica

KJ789121

This work

WX1

2011

Wenxian, Henan

D. opposita

KJ125475

This work

WX2

2011

Wenxian, Henan

D. alata

KJ789122

This work

WX3

2011

Wenxian, Henan

D. alata

KJ125478

This work

WX4

2011

Wenxian, Henan

D. opposita

KJ789123

This work

WX5

2011

Wenxian, Henan

D. opposita

KJ789124

This work

WX6

2011

Wenxian, Henan

D. opposita

KJ789125

This work

WX7

2011

Wenxian, Henan

D. opposita

KJ789126

This work

WX8

2011

Wenxian, Henan

D. opposita

KJ789127

This work

XZ1

2012

Xuzhou, Jiangsu

D. alata

KJ125478

This work

XZ2

2012

Xuzhou, Jiangsu

D. alata

KJ789128

This work

Andong

2014

South Korea

D. polystachya

KX156847

Unpublisheda

Brazil

2009

Brazil

D. alata

JX470965

(Filho et al. 2013)

Br2

2000

Brazil

D. alata

AF548498

(Bousalem et al. 2003)

CN1

2011

Yunnan, China

D. opposita

KC407674

(Wang et al. 2015)

CN20

2010

Yunnan, China

D. polystachya

KC473517

(Wang et al. 2015.)

Col 1

1999

Colombia

D. alata

AF548491

(Bousalem et al. 2003)

Col 2

1999

Colombia

D. alata

AF548492

(Bousalem et al. 2003)

CR 1

1999

Costa Rica

D. trifida

AF548499

(Bousalem et al. 2003)

DaBen 1

Benin

D. alata

AJ305471

Unpublisheda

DaCDI 19

Ivory Coast

D. alata

AJ305470

Unpublisheda

DaCDI 37

Ivory Coast

D. alata

AJ305469

Unpublisheda

DaCmn 42

Cameron

D. alata

AJ305468

Unpublisheda

DaGui 1

Guinea

D. alata

AJ305467

Unpublisheda

DaNig 2

Nigeria

D. alata

AJ305466

Unpublisheda

DaNig 316

Nigeria

D. alata

AJ305465

Unpublisheda

DaSLK 1

Sri-Lanka

D. alata

AJ305464

Unpublisheda

DaSLK 2

Sri-Lanka

D. alata

AJ305463

Unpublisheda

DaTog 2

Togo

D. alata

AJ305462

Unpublisheda

DaTog 3

Togo

D. alata

AJ305461

Unpublisheda

DaUga 1

Ghana

D. alata

AJ305460

Unpublisheda

DaUga 3

Ghana

D. alata

AJ305459

Unpublisheda

DaVan 1

Vanuatu

D. alata

AJ305458

Unpublisheda

DeSLK 1

Sri-Lanka

D. esculenta

AJ305457

Unpublisheda

DrCmn 11

Cameron

D. cayenensis- rotundata

AJ305456

Unpublisheda

DrGui 1

Guinea

D. cayenensis- rotundata

AJ305455

Unpublisheda

G1

India

D. alata

KJ463416

Unpublisheda

Guad 1

1998

Guadeloupe

D. alata

AF548500

(Bousalem et al. 2003)

Guad 2

1998

Guadeloupe

D. alata

AF548501

(Bousalem et al. 2003)

Guad 3

1998

Guadeloupe

D. alata

AF548502

(Bousalem et al. 2003)

Guad 4

1998

Guadeloupe

D. trifida

AF548503

(Bousalem et al. 2003)

Guad 5

1998

Guadeloupe

D. trifida

AF548504

(Bousalem et al. 2003)

Guad 6

1998

Guadeloupe

D. esculenta

AF548505

(Bousalem et al. 2003)

Guy 1

1998

French Guyana

D. trifida

AF548506

(Bousalem et al. 2003)

Guy 2

1998

French Guyana

D. trifida

AF548507

(Bousalem et al. 2003)

Guy 3

1998

French Guyana

D. trifida

AF548508

(Bousalem et al. 2003)

Guy 4

1998

French Guyana

D. trifida

AF548509

(Bousalem et al. 2003)

Guy 5

1998

French Guyana

D. trifida

AF548510

(Bousalem et al. 2003)

Guy 6

1998

French Guyana

D. trifida

AF548511

(Bousalem et al. 2003)

Guy 7

1998

French Guyana

D. trifida

AF548512

(Bousalem et al. 2003)

Guy 8

1998

French Guyana

D. trifida

AF548513

(Bousalem et al. 2003)

JPN 1

1997

Japan

D. alata

AF548519

(Bousalem et al. 2003)

JPN 2

1998

Japan

D. alata

AF548520

(Bousalem et al. 2003)

JPN 3

1998

Japan

D. alata

AF548521

(Bousalem et al. 2003)

Mart 1

1998

Martinique

D. cayenensis- rotundata

AF548493

(Bousalem et al. 2003)

Mart 2

1998

Martinique

D. alata

AF548494

(Bousalem et al. 2003)

Mart 3

1998

Martinique

D. alata

AF548495

(Bousalem et al. 2003)

Mart 4

1998

Martinique

D. alata

AF548496

(Bousalem et al. 2003)

Mart 5

1998

Martinique

D. cayenensis- rotundata

AF548497

(Bousalem et al. 2003)

Mart 6

1998

Martinique

D. alata

AF548528

(Bousalem et al. 2003)

PNG 1

1993

Papua New Guinea

D. alata

AF548523

(Bousalem et al. 2003)

PNG 2

1993

Papua New Guinea

D. alata

AF548524

(Bousalem et al. 2003)

PNG 4

1994

Papua New Guinea

D. alata

AF548526

(Bousalem et al. 2003)

Togo 1

1999

Togo

D. alata

AF548514

(Bousalem et al. 2003)

Togo 2

1999

Togo

D. dumetorum

AF548527

(Bousalem et al. 2003)

India 3-Da

2008

India

D. alata

FJ390024

(Bousalem et al. 2003)

India 4-Da

2009

India

D. alata

HQ231894

(Bousalem et al. 2003)

M5_StoDgo

2014

Cuba

D. esculenta

MK780009

Unpublisheda

M4_StoDgo

2014

Cuba

D. rotundata subsp. rotundata

MK780008

Unpublisheda

M3_StoDgo

2014

Cuba

D. alata

MK780007

Unpublisheda

10_StoDgo

2011

Cuba

D. esculenta

MK780006

Unpublisheda

9_StoDgo

2011

Cuba

D. esculenta

MK780005

Unpublisheda

4_StoDgo

2011

Cuba

D. alata

MK780004

Unpublisheda

2_StoDgo

2011

Cuba

D. alata

MK780003

Unpublisheda

  1. a Download sequence information from GenBank