From: Genetic diversity and genome recombination in Yam mild mosaic virus isolates
Isolate | Year of collection | Geographic location | Host | GenBank accession no. | Reference |
---|---|---|---|---|---|
FX1 | 2012 | Fengxian, Jiangsu | D. opposita | KJ125474 | This work |
FX2 | 2012 | Fengxian, Jiangsu | D. opposita | KJ789113 | This work |
Luzhai | 2010 | Luzhai, Guangxi | D. opposita | JF357963 | This work |
LZ1 | 2010 | Luzhai, Guangxi | D. alata | KJ789114 | This work |
Nanning | 2010 | Nanning, Guangxi | D. opposita | JF357962 | This work |
NC1 | 2011 | Nanchang, Jiangxi | D. alata | KJ125476 | This work |
NC2 | 2011 | Nanchang, Jiangxi | D. alata | KJ125477 | This work |
NC3 | 2011 | Nanchang, Jiangxi | D. alata | KJ125473 | This work |
NN1 | 2011 | Nanning, Guangxi | D. alata | KJ125472 | This work |
NN2 | 2010 | Nanning, Guangxi | D. japonica | KJ789115 | This work |
NN3 | 2011 | Nanning, Guangxi | D. alata | KJ789116 | This work |
NN4 | 2011 | Nanning, Guangxi | D. alata | KJ789117 | This work |
NN5 | 2011 | Nanning, Guangxi | D. alata | KJ789118 | This work |
SG1 | 2011 | Shouguang, Shandong | D. opposita | KJ789119 | This work |
SG2 | 2011 | Shouguang, Shandong | D. opposita | KJ789120 | This work |
WM1 | 2010 | Wuming, Guangxi | D. japonica | KJ789121 | This work |
WX1 | 2011 | Wenxian, Henan | D. opposita | KJ125475 | This work |
WX2 | 2011 | Wenxian, Henan | D. alata | KJ789122 | This work |
WX3 | 2011 | Wenxian, Henan | D. alata | KJ125478 | This work |
WX4 | 2011 | Wenxian, Henan | D. opposita | KJ789123 | This work |
WX5 | 2011 | Wenxian, Henan | D. opposita | KJ789124 | This work |
WX6 | 2011 | Wenxian, Henan | D. opposita | KJ789125 | This work |
WX7 | 2011 | Wenxian, Henan | D. opposita | KJ789126 | This work |
WX8 | 2011 | Wenxian, Henan | D. opposita | KJ789127 | This work |
XZ1 | 2012 | Xuzhou, Jiangsu | D. alata | KJ125478 | This work |
XZ2 | 2012 | Xuzhou, Jiangsu | D. alata | KJ789128 | This work |
Andong | 2014 | South Korea | D. polystachya | KX156847 | Unpublisheda |
Brazil | 2009 | Brazil | D. alata | JX470965 | (Filho et al. 2013) |
Br2 | 2000 | Brazil | D. alata | AF548498 | (Bousalem et al. 2003) |
CN1 | 2011 | Yunnan, China | D. opposita | KC407674 | (Wang et al. 2015) |
CN20 | 2010 | Yunnan, China | D. polystachya | KC473517 | (Wang et al. 2015.) |
Col 1 | 1999 | Colombia | D. alata | AF548491 | (Bousalem et al. 2003) |
Col 2 | 1999 | Colombia | D. alata | AF548492 | (Bousalem et al. 2003) |
CR 1 | 1999 | Costa Rica | D. trifida | AF548499 | (Bousalem et al. 2003) |
DaBen 1 | – | Benin | D. alata | AJ305471 | Unpublisheda |
DaCDI 19 | – | Ivory Coast | D. alata | AJ305470 | Unpublisheda |
DaCDI 37 | – | Ivory Coast | D. alata | AJ305469 | Unpublisheda |
DaCmn 42 | – | Cameron | D. alata | AJ305468 | Unpublisheda |
DaGui 1 | – | Guinea | D. alata | AJ305467 | Unpublisheda |
DaNig 2 | – | Nigeria | D. alata | AJ305466 | Unpublisheda |
DaNig 316 | – | Nigeria | D. alata | AJ305465 | Unpublisheda |
DaSLK 1 | – | Sri-Lanka | D. alata | AJ305464 | Unpublisheda |
DaSLK 2 | – | Sri-Lanka | D. alata | AJ305463 | Unpublisheda |
DaTog 2 | – | Togo | D. alata | AJ305462 | Unpublisheda |
DaTog 3 | – | Togo | D. alata | AJ305461 | Unpublisheda |
DaUga 1 | – | Ghana | D. alata | AJ305460 | Unpublisheda |
DaUga 3 | – | Ghana | D. alata | AJ305459 | Unpublisheda |
DaVan 1 | – | Vanuatu | D. alata | AJ305458 | Unpublisheda |
DeSLK 1 | – | Sri-Lanka | D. esculenta | AJ305457 | Unpublisheda |
DrCmn 11 | – | Cameron | D. cayenensis- rotundata | AJ305456 | Unpublisheda |
DrGui 1 | – | Guinea | D. cayenensis- rotundata | AJ305455 | Unpublisheda |
G1 | – | India | D. alata | KJ463416 | Unpublisheda |
Guad 1 | 1998 | Guadeloupe | D. alata | AF548500 | (Bousalem et al. 2003) |
Guad 2 | 1998 | Guadeloupe | D. alata | AF548501 | (Bousalem et al. 2003) |
Guad 3 | 1998 | Guadeloupe | D. alata | AF548502 | (Bousalem et al. 2003) |
Guad 4 | 1998 | Guadeloupe | D. trifida | AF548503 | (Bousalem et al. 2003) |
Guad 5 | 1998 | Guadeloupe | D. trifida | AF548504 | (Bousalem et al. 2003) |
Guad 6 | 1998 | Guadeloupe | D. esculenta | AF548505 | (Bousalem et al. 2003) |
Guy 1 | 1998 | French Guyana | D. trifida | AF548506 | (Bousalem et al. 2003) |
Guy 2 | 1998 | French Guyana | D. trifida | AF548507 | (Bousalem et al. 2003) |
Guy 3 | 1998 | French Guyana | D. trifida | AF548508 | (Bousalem et al. 2003) |
Guy 4 | 1998 | French Guyana | D. trifida | AF548509 | (Bousalem et al. 2003) |
Guy 5 | 1998 | French Guyana | D. trifida | AF548510 | (Bousalem et al. 2003) |
Guy 6 | 1998 | French Guyana | D. trifida | AF548511 | (Bousalem et al. 2003) |
Guy 7 | 1998 | French Guyana | D. trifida | AF548512 | (Bousalem et al. 2003) |
Guy 8 | 1998 | French Guyana | D. trifida | AF548513 | (Bousalem et al. 2003) |
JPN 1 | 1997 | Japan | D. alata | AF548519 | (Bousalem et al. 2003) |
JPN 2 | 1998 | Japan | D. alata | AF548520 | (Bousalem et al. 2003) |
JPN 3 | 1998 | Japan | D. alata | AF548521 | (Bousalem et al. 2003) |
Mart 1 | 1998 | Martinique | D. cayenensis- rotundata | AF548493 | (Bousalem et al. 2003) |
Mart 2 | 1998 | Martinique | D. alata | AF548494 | (Bousalem et al. 2003) |
Mart 3 | 1998 | Martinique | D. alata | AF548495 | (Bousalem et al. 2003) |
Mart 4 | 1998 | Martinique | D. alata | AF548496 | (Bousalem et al. 2003) |
Mart 5 | 1998 | Martinique | D. cayenensis- rotundata | AF548497 | (Bousalem et al. 2003) |
Mart 6 | 1998 | Martinique | D. alata | AF548528 | (Bousalem et al. 2003) |
PNG 1 | 1993 | Papua New Guinea | D. alata | AF548523 | (Bousalem et al. 2003) |
PNG 2 | 1993 | Papua New Guinea | D. alata | AF548524 | (Bousalem et al. 2003) |
PNG 4 | 1994 | Papua New Guinea | D. alata | AF548526 | (Bousalem et al. 2003) |
Togo 1 | 1999 | Togo | D. alata | AF548514 | (Bousalem et al. 2003) |
Togo 2 | 1999 | Togo | D. dumetorum | AF548527 | (Bousalem et al. 2003) |
India 3-Da | 2008 | India | D. alata | FJ390024 | (Bousalem et al. 2003) |
India 4-Da | 2009 | India | D. alata | HQ231894 | (Bousalem et al. 2003) |
M5_StoDgo | 2014 | Cuba | D. esculenta | MK780009 | Unpublisheda |
M4_StoDgo | 2014 | Cuba | D. rotundata subsp. rotundata | MK780008 | Unpublisheda |
M3_StoDgo | 2014 | Cuba | D. alata | MK780007 | Unpublisheda |
10_StoDgo | 2011 | Cuba | D. esculenta | MK780006 | Unpublisheda |
9_StoDgo | 2011 | Cuba | D. esculenta | MK780005 | Unpublisheda |
4_StoDgo | 2011 | Cuba | D. alata | MK780004 | Unpublisheda |
2_StoDgo | 2011 | Cuba | D. alata | MK780003 | Unpublisheda |