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Table 1 Comparison of the cleavage sites of the polyprotein among PalMV and some related potyviruses

From: A new potyvirus isolated from Pennisetum alopecuroides with the potential to infect cereal crops

Virusa

P1/HC-Pro

HC-Pro/P3

P3/6K1

6K1/CI

CI/6K2

6K2/VPg

VPg/NIa-Pro

NIa-Pro/NIb

NIb/CP

SrMV

NEIDHF/S

REYVVG/G

TGVIHE/A

TQVTHQ/S

TTVIHQ/G

MKVCHQ/G

VEVEHE/S

CEVTEQ/G

IDVFHQ/A

PVY

NSMIQF/S

KHYRVG/G

YDVRHQ/R

YEVRHQ/S

QFVHHQ/A

ETVSHQ/G

QEVEHE/A

DVVVEQ/A

YEVHHQ/A

CSV

NGMVEY/S

KNYQVG/G

PMVKHQ/A

QSVHHQ/M

NIVQHQ/T

EPVHHQ/G

SYVDHE/T

QFVSMQ/S

PYVSHQ/A

MDMV

QEIEHY/A

REYAVG/G

VGVIHE/G

SQVTHQ/S

VTVIHQ/G

TDVKHE/A

VEVEHE/A

FDVTEQ/G

IDVKHQ/A

PenMV

LDINHY/A

RDYIVG/G

TGVIHE/H

RNVVHQ/S

NTVIHQ/G

QDVTHQ/G

EGVTHE/A

DDVQEQ/G

EDVYHQ/S

SCMV

MEIEHY/A

REYIVG/G

TGVIHE/G

PPVTQQ/S

NTVIHQ/G

TEVSHQ/G

AGVAHE/S

MSVEEQ/C

EDVFHQ/S

JGMV

KQICHY/S

KEYIVG/G

TEVEHE/R

QEVKHE/G

QTVIHE/N

TEVEHE/G

PEVEHE/G

ERISNE/S

VDVEHQ/S

CaYSV

SLIDHY/A

KGYVVG/G

DEVEHQ/K

TTVEHQ/G

QTVIHE/T

MDVEHQ/A

ADVEHE/G

MHNVSE/D

LEVEHQ/A

PalMV

REIEHY/S

KDYVVG/G

EEVEHQ/K

TEVEHQ/G

QTVIHE/G

TEVEHQ/G

VNVEHE/G

HSVDDV/K

IEVEHQ/S

  1. a SrMV, sorghum mosaic virus; PVY, potato virus Y; CSV, cocksfoot streak virus; MDMV, maize dwarf mosaic virus; PenMV, pennisetum mosaic virus; SCMV, sugarcane mosaic virus; JGMV, johnsongrass mosaic virus; CaYSV, canna yellow streak virus