Table 1 Comparison of the cleavage sites of the polyprotein among PalMV and some related potyviruses
From: A new potyvirus isolated from Pennisetum alopecuroides with the potential to infect cereal crops
| Virusa | P1/HC-Pro | HC-Pro/P3 | P3/6K1 | 6K1/CI | CI/6K2 | 6K2/VPg | VPg/NIa-Pro | NIa-Pro/NIb | NIb/CP |
|---|---|---|---|---|---|---|---|---|---|
| SrMV | NEIDHF/S | REYVVG/G | TGVIHE/A | TQVTHQ/S | TTVIHQ/G | MKVCHQ/G | VEVEHE/S | CEVTEQ/G | IDVFHQ/A |
| PVY | NSMIQF/S | KHYRVG/G | YDVRHQ/R | YEVRHQ/S | QFVHHQ/A | ETVSHQ/G | QEVEHE/A | DVVVEQ/A | YEVHHQ/A |
| CSV | NGMVEY/S | KNYQVG/G | PMVKHQ/A | QSVHHQ/M | NIVQHQ/T | EPVHHQ/G | SYVDHE/T | QFVSMQ/S | PYVSHQ/A |
| MDMV | QEIEHY/A | REYAVG/G | VGVIHE/G | SQVTHQ/S | VTVIHQ/G | TDVKHE/A | VEVEHE/A | FDVTEQ/G | IDVKHQ/A |
| PenMV | LDINHY/A | RDYIVG/G | TGVIHE/H | RNVVHQ/S | NTVIHQ/G | QDVTHQ/G | EGVTHE/A | DDVQEQ/G | EDVYHQ/S |
| SCMV | MEIEHY/A | REYIVG/G | TGVIHE/G | PPVTQQ/S | NTVIHQ/G | TEVSHQ/G | AGVAHE/S | MSVEEQ/C | EDVFHQ/S |
| JGMV | KQICHY/S | KEYIVG/G | TEVEHE/R | QEVKHE/G | QTVIHE/N | TEVEHE/G | PEVEHE/G | ERISNE/S | VDVEHQ/S |
| CaYSV | SLIDHY/A | KGYVVG/G | DEVEHQ/K | TTVEHQ/G | QTVIHE/T | MDVEHQ/A | ADVEHE/G | MHNVSE/D | LEVEHQ/A |
| PalMV | REIEHY/S | KDYVVG/G | EEVEHQ/K | TEVEHQ/G | QTVIHE/G | TEVEHQ/G | VNVEHE/G | HSVDDV/K | IEVEHQ/S |