Table 1 Sweet potato virus species and their distribution in China
From: Species and genetic variability of sweet potato viruses in China
Species | Genus | GenBank no. of representative sequences | Distribution (provinces) | Methods |
|---|---|---|---|---|
Sweet potato feathery mottle virus | Potyvirus | MK778785, MK778794, MK778796 | Anhui, Beijing, Chongqing, Fujian, Gansu, Guangdong, Guangxi, Guizhou, Hainan, Henan, Hebei, Hubei, Hunan, Jiangsu, Jiangxi, Liaoning, Ningxia, Shandong, Shaanxi, Shanxi, Sichuan, Yunnan and Zhejiang | NGS, PCR |
Sweet potato virus C | Potyvirus | MK778817 | Chongqing, Fujian, Guangdong, Guangxi, Guizhou, Hainan, Hebei, Hubei, Jiangsu, Jiangxi, Shandong and Sichuan | NGS, PCR |
Sweet potato virus G | Potyvirus | MK778826, MK778834, MK778835, MK778837, MK778838 | Anhui, Beijing, Chongqing, Fujian, Guangxi, Gansu, Guangdong, Jiangxi, Guizhou, Hainan, Hebei, Henan, Hunan, Hubei, Jiangsu, Liaoning, Ningxia, Shaanxi, Shandong, Sichuan, Yunnan and Zhejiang | NGS, PCR |
Sweet potato latent virus | Potyvirus | MK778808 | Anhui, Chongqing, Guangdong, Hebei, Henan, Hubei, Hunan, Jiangsu, Jiangxi, Liaoning, Shaanxi, Shanxi, Shandong and Sichuan | NGS, PCR |
Sweet potato virus 2 | Potyvirus | MK778812 | Anhui, Chongqing, Fujian, Hebei, Henan, Hunan, Jiangsu, Jiangxi, Liaoning, Shaanxi, Shanxi, Sichuan and Shandong | NGS, PCR |
Sweet potato leaf curl Hubei virus* | Begomovirus | MH577011, MK951974, MK931305, MK931304 | Hebei, Hubei, Hunan, Jiangsu, Shandong and Yunnan | NGS, PCR, RCA |
Sweet potato leaf curl Canary virus | Begomovirus | MK931306 | Guangdong, Hebei and Henan | PCR |
Sweet potato leaf curl Georgia virus | Begomovirus | MK931310 | Fujian, Hebei, Henan, Hainan, Shandong, Sichuan, Jiangxi and Zhejiang | PCR |
Sweet potato leaf curl Guangxi virus | Begomovirus | MK931313, MK951966 | Guangxi, Guangdong, Hebei, Henan, Hunan, Jiangsu, Shandong and Sichuan | PCR |
Sweet potato leaf curl Sichuan virus 1 | Begomovirus | MN186254 | Guangdong, Guangxi, Henan, Hunan, Jiangsu and Sichuan | PCR |
Sweet potato leaf curl Sichuan virus 2 | Begomovirus | MK931315 | Guangdong, Hebei, Henan, Hunan, Jiangsu and Sichuan | PCR |
Sweet potato leaf curl virus | Begomovirus | MK951979, MK931320, MK931321 | Anhui, Beijing, Chongqing, Fujian, Guangdong, Guangxi, Hainan, Hebei, Henan, Hubei, Hunan, Jiangsu, Jiangxi, Jilin, Shaanxi, Shandong, Sichuan and Yunnan | PCR |
Sweet potato leaf curl China virus | Begomovirus | MK951977 | Guangdong, Guizhou, Henan, Jiangsu, and Shandong | PCR |
Cucumber mosaic virus | Cucumovirus | MK778778 | Anhui, Chongqing, Fujian, Guangdong, Guangxi, Hainan, Henan, Hubei, Jiangsu, Shaanxi, Shandong, Shanxi, Sichuan and Zhejiang | NGS |
Sweet potato collusive virusâ•‚ | Cavemovirus | MK802082 | Chongqing and Hainan | NGS, PCR |
Tobacco mosaic virusâ•‚ | Tobamovirus | MN186255 | Henan | NGS |
Sweet potato badnavirus A | Badnavirus | KJ463420 | Anhui, Chongqing, Guangxi, Hebei, Henan, Hubei, Hunan, Jiangsu, Shaanxi and Shandong | NGS, PCR |
Sweet potato badnavirus B | Badnavirus | KP407560 | Henan, Hubei, Hunan, Jiangsu, Shaanxi and Shandong | NGS, PCR |
Sweet potato symptomless virus 1 | Mastrevirus | MG603668 | Chongqing, Guangdong, Guangxi, Hebei, Henan, Jiangsu, Shandong and Shaanxi | NGS, PCR |
Sweet potato chlorotic fleck virus | Carlavirus | MK778783 | Anhui, Chongqing, Fujian, Guangdong, Guangxi, Guizhou, Hainan, Henan, Hunan, Jiangsu, Shaanxi, Shanxi, Shandong, Yunnan and Sichuan | NGS, PCR |
Sweet potato chlorotic stunt virus | Crinivirus | MK802071 | Anhui, Chongqing, Fujian, Guangdong, Guangxi, Guizhou, Hainan and Hebei, Henan, Hubei, Hunan, Jiangsu, Ningxia, Shaanxi, Shandong, Shanxi, Sichuan and Zhejiang | NGS, PCR |