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Fig. 1 | Phytopathology Research

Fig. 1

From: Viral suppressors from members of the family Closteroviridae combating antiviral RNA silencing: a tale of a sophisticated arms race in host-pathogen interactions

Fig. 1

A phylogenetic tree demonstrating the linkages between species and genera within the family Closteroviridae on the basis of the amino acids sequence of RdRp. A multiple sequence alignment of RdRp amino acids sequence was performed using CLUSTALW. A phylogenetic tree was constructed with MEGA7 software using the neighbor-joining method and bootstrapped 1000 times. The numbers on nodes particularly signify bootstrapped confidence percentages. The abbreviations and accession numbers of closterovirids involved in this tree: Actinidia virus 1 (AcV-1; YP_009407919.1); Air potato virus 1 (AiPoV-1; AZB50207.1); Areca palm velarivirus 1 (APV-1; YP_009140432.1); Bean yellow disorder virus (BnYDV; YP_001816770.1); Beet pseudo yellows virus (BPYV; NP_940796.1); Blueberry virus A (BVA; YP_006638806.1); Blackberry vein banding-associated virus (BVBaV; YP_008411010.1); Beet yellow stunt virus (BYSV; AAC55659.2); Beet yellows virus (BYV; AAF14300.1); Blackberry yellow vein-associated virus (BYVaV; YP_227378.1); Cucurbit chlorotic yellows virus (CCYV; AFN61343.1); Cordyline virus 1 (CoV-1; YP_009506344.1); Cordyline virus 2 (CoV-2; AFJ05046.1); Cordyline virus 3 (CoV-3; AFJ05056.2); Cordyline virus 4 (CoV-4; AFJ05062.2); Carnation necrotic fleck virus (CNFV; YP_009506332.1); Citrus tristeza virus (CTV; ANA04448.1); Carrot yellow leaf virus (CYLV; YP_003075965.1); Cucurbit yellow stunting disorder virus (CYSDV; AAM73639.2); Diodia vein chlorosis virus (DVCV; YP_009507950.1); Grapevine leafroll-associated virus 1 (GLRaV-1; YP_004940642.1); Grapevine leafroll-associated virus 2 (GLRaV-2; AFV34734.1); Grapevine leafroll-associated virus 3 (GLRaV-3; AXI81954.1); Grapevine leafroll-associated virus 4 (GLRaV-4; AKB90851.1); Grapevine leafroll-associated virus 7 (GLRaV-7; YP_004935919.1); Grapevine leafroll-associated virus 13 (GLRaV-13; BAU68561.1); Little cherry virus 1 (LChV-1; AXN70106.1); Little cherry virus 2 (LChV-2; AAM96221.1); Lettuce chlorosis virus (LCV; AST35785.1); Lettuce infectious yellows virus (LIYV; AAA61798.1); Mint virus 1, (MV-1; YP_224091.1); Olive leaf yellowing-associated virus (OLYaV; CAD29306.1); Plum bark necrosis stem pitting-associated virus (PBNSPaV; AGL80631.1); Persimmon virus B (PeVB; YP_009112883.1); Pineapple mealybug wilt-associated virus 1 (PMWaV-1; ABR68934.1); Pineapple mealybug wilt-associated virus 2 (PMWaV-2; AAG13939.1); Pineapple mealybug wilt-associated virus 3 (PMWaV-3; ABD62348.1); Potato yellow vein virus (PYVV; ASD49931.1); Raspberry leaf mottle virus (RLMoV; YP_874185.1); Rose leaf rosette-associated virus (RLRaV; YP_009058929.1); Strawberry chlorotic fleck-associated virus (SCFaV; YP_762622.1); Strawberry pallidosis-associated virus (SPaV; YP_003289291.1); Sweet potato chlorotic stunt virus (SPCSV; AEA92656.1); Tomato infectious chlorosis virus (TICV; YP_003204952.1); Tomato chlorosis virus (ToCV; YP_293695.1); Tobacco virus 1 (TV-1; YP_009162622.1); Tetterwort vein chlorosis virus (TVCV; YP_009507961.1)

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