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Table 4 Haplotypes identified in Heterodera avenae populations based on ITS1

From: Population genetics of the cereal cyst nematode Heterodera avenae reveal geographical segregation and host adaptation

Haplotype

N*

Sample codes

GenBank accession number

Haplotype frequency (%)

Hap1

1

QHJTX2

OP217022

4.17

Hap2

1

QHHZ3

OP217028

4.17

Hap3

1

GSPL

OP217024

4.17

Hap4

1

QHQL3

OP217025

4.17

Hap5

4

QHHY1, QHMQ2, SXWN5 and QHHZ7

OP217043, OP217042,

OP217027, OP217041

16.67

Hap6

1

SXWN6

OP217043

4.17

Hap7

1

QHHZ4

OP217023

4.17

Hap8

1

QHJTX3

OP217029

4.17

Hap9

1

QHHY5

OP217030

4.17

Hap10

4

QHHY4, QHHY6, QHHB6, and QHHB7

OP217031, OP217032, OP217035, OP217036

16.67

Hap11

2

QHHB4 and QHHB5

OP217033, OP217034

8.33

Hap12

4

QHHY2, QHGQ2, QHHZ6 and QHHZ5

OP217037, OP217039, OP217045, OP217044

16.67

Hap13

1

QHYN2

OP217026

4.17

Hap14

1

QHQL2

OP217040

4.17

  1. N* represents the number of sequences in each haplotype