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Table 2 Differentially expressed circRNAs in rice ZH11 plants after 48 h of Xoo infection

From: Xoo-responsive transcriptome reveals the role of the circular RNA133 in disease resistance by regulating expression of OsARAB in rice

ID of circRNAs

Expression level (FPKM)

Change

Parental genes

Before

Xoo infection

3:11550445|11551137

(ciR133)

0

4722 ± 2395

Up

Os03g0320100 (a-L-arabinofuranosidase)

4:31276588|31301714

0

237 ± 79

Up

 

3:267628|268062

(ciR52)

27,428 ± 3023

54,844 ± 7270

Up

 

11:6657912|6707725

65 ± 34

146 ± 64

Up

 

4:35093089|35095669

(ciR298)

3270 ± 1484

8797 ± 2854

Up

Os04g0686650

9:10618503|10619042

2712 ± 3134

10,231 ± 3401

Up

Os09g0268300 (Hexose carrier)

9:5140146|5140580

0

2099 ± 1110

Up

Os09g0343200

4:24014063|24014278

0

4723 ± 2048

Up

 

1:18152219|18153178

0

1692 ± 880

Up

 

7:28426090|28427266

0

1851 ± 1372

Up

Os07g0672500

6:2448727|2448878

20,522 ± 18,735

0

Down

 

6:16279995|16280386

4840 ± 2127

0

Down

Os06g0480200

8:27930611|27963872

592 ± 8

0

Down

 

4:34965141|34969807

4949 ± 1711

1428 ± 471

Down

Os04g0684500 (OsWSL5, white stripe leaf 5)