Table 7 Benefits of integrating omics data and advanced imaging in plant pathogen detection and management
Benefit | Description | Applications | Challenges | Reference |
|---|---|---|---|---|
Novel Insights | Integration of omics data provides a comprehensive view of plant-pathogen interactions, uncovering novel insights | Pathogen research, disease-resistant crop development, understanding plant defense mechanisms | Data integration, computational complexity, and understanding of biological systems | Großkinsky et al. (2018) |
New Intervention Targets | Understanding plant-pathogen interactions helps identify new intervention targets, such as genes, proteins, or metabolites | Targeted gene editing, new crop protection chemicals, and natural resistance mechanisms for breeding | Target validation, off-target effects, regulatory hurdles | Rato et al. (2021) |
Effective Management Strategies | A comprehensive understanding of plant-pathogen interactions facilitates targeted and effective disease management strategies | Disease-resistant plant breeding, innovative control agents, optimizing existing management practices | Balancing resistance and agronomic performance, resistance-breaking pathogens, economic considerations | Nelson (2020) |
Early Detection and Monitoring | The synergy between HTS and advanced imaging enables early detection and monitoring of plant diseases at the field level | Remote sensing for monitoring, early warning systems, and improved decision-making for disease management | Sensing and imaging limitations, data storage and processing, and translating data to actionable information | Oerke (2020) |
Precision Agriculture | Integrating omics data and advanced imaging contributes to precision agriculture, tailoring management decisions to individual plants or fields | Site-specific management, crop input optimization, sustainable practices, improved crop productivity, and resource efficiency | Initial investment costs, farmer adoption and education, data privacy concerns, and infrastructure requirements | Holzinger et al. (2023) |